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The Protobuf Search Paths Settings are stored in a UAT (config file) that is stored with each Configuration Profile:

Protobuf Search Paths (protobuf_search_paths) (Section 11.21, “Protobuf Search Paths”)

You could use the same profile (-C gRPC_foo) and modify the config file (protobuf_search_paths) in the profile before running Wireshark or TShark each time.

Or you could have several/many profiles (gRPC_foo1, gRPC_foo2, gRPC_foo3, gRPC_foo4) and modify the search path settings for each before. Then run Wireshark/TShark -C gRPC_fooX as appropriate.