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Are you saying that you've got 2 fragments of your upper-layer protocol in a single IP packet/Ethernet frame and you want to be able to reassemble them?
I believe that, yes, this will work. I'm pretty sure I've seen this happen with SCTP. It was bizarre (though apparently legal--IIRC) that SCTP could fragment and put the 2 fragments in a single IP packet.
How this would work I'm not really sure; the SCTP dissector might serve as a useful reference.
